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Changelog

mpwR 0.1.5

  • Updated prepare_mpwR function - improvements for MaxQuant import: Precursor Intensities with 0 are excluded
  • Updated prepare_mpwR function - improvements for DIA-NN import: Precursor.Quantity with 0 are excluded
  • Updated prepare_mpwR function - improvements for DIA-NN import: new parameter added to filter specific PG.Q.Value and Q.Value; default for both at 1% (0.01)

mpwR 0.1.4

CRAN release: 2023-05-05

  • Added function load_experimental_design
  • Added function write_experimental_design
  • Added further user-friendly error messaging in prepare_mpwR
  • Added further description in write_generic_template

mpwR 0.1.3

CRAN release: 2023-03-16

  • Added article “Output Explanations” to package website
  • Added article “Use case - Round robin study” to package website
  • Added article “Use case - Software comparison” to package website
  • Added generic input option
  • Added function to write template for generic input

mpwR 0.1.2

CRAN release: 2023-02-12

Minor changes

  • Added MQ pg default filter.
  • Altered color palette for MC/DC stacked barplots.
  • Altered column requirements for PD.
  • Minor changes in vignettes.

Bug fix

  • Fixed rounding issue in DC/MC percentage plots.

mpwR 0.1.1

  • Minor changes in some examples.
  • Minor changes in vignettes.

mpwR 0.1.0

CRAN release: 2022-06-22

  • First release version.