Package index
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create_example() - Create example data
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get_CV_LFQ_pep() - Peptide-level: Quantitative precision
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get_CV_LFQ_pg() - Proteingroup-level: Quantitative precision
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get_CV_RT() - Retention time precision
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get_DC_Report() - Data Completeness Report
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get_ID_Report() - Report for identifications
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get_MC_Report() - Report about Missed Cleavages
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get_summary_Report() - Summary report
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get_Upset_list() - Generate Upset list
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load_experimental_design() - Load and Prepare the input data with experimental design file
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plot_CV_density() - Density plot
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plot_DC_barplot() - Individual Barplots - Data Completeness
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plot_DC_stacked_barplot() - Summary Barplot - Data Completeness
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plot_ID_barplot() - Individual Barplots - Identifications
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plot_ID_boxplot() - Summary Boxplot - Identifications
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plot_MC_barplot() - Individual Barplots - Missed Cleavages
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plot_MC_stacked_barplot() - Summary Barplot - Missed Cleavages
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plot_radarchart() - Radar chart
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plot_Upset() - Upset Plot
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prepare_mpwR() - Load and Prepare the input data
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write_experimental_design() - Create template for experimental design
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write_generic_template() - Create generic template