Function reference • mpwR

All functions

create_example(): Create example data

get_CV_LFQ_pep(): Peptide-level: Quantitative precision

get_CV_LFQ_pg(): Proteingroup-level: Quantitative precision

get_CV_RT(): Retention time precision

get_DC_Report(): Data Completeness Report

get_ID_Report(): Report for identifications

get_MC_Report(): Report about Missed Cleavages

get_summary_Report(): Summary report

get_Upset_list(): Generate Upset list

load_experimental_design(): Load and Prepare the input data with experimental design file

plot_CV_density(): Density plot

plot_DC_barplot(): Individual Barplots - Data Completeness

plot_DC_stacked_barplot(): Summary Barplot - Data Completeness

plot_ID_barplot(): Individual Barplots - Identifications

plot_ID_boxplot(): Summary Boxplot - Identifications

plot_MC_barplot(): Individual Barplots - Missed Cleavages

plot_MC_stacked_barplot(): Summary Barplot - Missed Cleavages

plot_radarchart(): Radar chart

plot_Upset(): Upset Plot

prepare_mpwR(): Load and Prepare the input data

write_experimental_design(): Create template for experimental design

write_generic_template(): Create generic template