Create template for experimental design

Generation of a exp_design.csv file for using the import option with load_experimental_design.

Usage

write_experimental_design(path)

Arguments

path

Path to folder where exp_design file is generated.

Value

This function returns a csv-file with the following columns:

• analysis_name - name of your analysis.

• software - name of used software: DIA-NN, MaxQuant, PD, Spectronaut, Generic.

• path_to_folder - path to analysis folder.

Details

The generated exp_design.csv file can be used as starting point for importing with the load_experimental_design option for mpwR. Example entries are provided. The template file - exp_design.csv - is generated under the specified path.

Author

Oliver Kardell

Examples

if (FALSE) {
write_experimental_design(path = "DIRECTORY_WHERE_FILE_IS_GENERATED")
}